TitleDateAuthorsDOI
Geometric morphometrics and paleoproteomics enlighten the paleodiversity of Pongo2023-12-15Kubat, J; Paterson, R; Patramanis, I; Barker, G; Demeter, F; Filoux, A; Kullmer, O; Mackie, M; Marques-Bonet, T; Huong, NTM; Tuan, NA; Pheng, S; Rippe (2023). Geometric morphometrics and paleoproteomics enlighten the paleodiversity of Pongo. Plos One, 18(12), e0291308-. DOI: 10.1371/journal.pone.0291308https://doi.org/10.1371/journal.pone.0291308
Atherosclerotic plaque development in mice is enhanced by myeloid ZEB1 downregulation2023-12-14Martinez-Campanario, MC; Cortés, M; Moreno-Lanceta, A; Han, L; Ninfali, C; Domínguez, V; Andrés-Manzano, MJ; Farràs, M; Esteve-Codina, A; Enrich, C; D (2023). Atherosclerotic plaque development in mice is enhanced by myeloid ZEB1 downregulation. Nature Communications, 14(1), 8316-. DOI: 10.1038/s41467-023-43896-7https://doi.org/10.1038/s41467-023-43896-7
The Medical Action Ontology: A tool for annotating and analyzing treatments and clinical management of human disease2023-12-08Carmody, LC; Gargano, MA; Toro, S; Vasilevsky, NA; Adam, MP; Blau, H; Chan, LE; Gomez-Andres, D; Horvath, R; Kraus, ML; Ladewig, MS; Lewis-Smith, D; L (2023). The Medical Action Ontology: A tool for annotating and analyzing treatments and clinical management of human disease. Med, 4(12), 913-927.e3. DOI: 10.1016/j.medj.2023.10.003https://doi.org/10.1016/j.medj.2023.10.003
A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797)2023-12-06Destanovic, D; Schultz, DT; Styfhals, R; Cruz, F; Gómez-Garrido, J; Gut, M; Gut, I; Fiorito, G; Simakov, O; Alioto, TS; Ponte, G; Seuntjens, E (2023). A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797). G3-Genes Genomes Genetics, 13(12), -. DOI: 10.1093/g3journal/jkad220https://doi.org/10.1093/g3journal/jkad220
Enhanced Susceptibility to Tomato Chlorosis Virus (ToCV) in Hsp90- and Sgt1-Silenced Plants: Insights from Gene Expression Dynamics2023-12-01Ontiveros, I; Fernandez-Pozo, N; Esteve-Codina, A; Lopez-Moya, JJ; Diaz-Pendon, JA; Aranda, MA (2023). Enhanced Susceptibility to Tomato Chlorosis Virus (ToCV) in Hsp90- and Sgt1-Silenced Plants: Insights from Gene Expression Dynamics. Viruses-Basel, 15(12), 2370-. DOI: 10.3390/v15122370https://doi.org/10.3390/v15122370
Complex Evolutionary History With Extensive Ancestral Gene Flow in an African Primate Radiation2023-12-01Jensen, A; Swift, F; de Vries, D; Beck, RMD; Kuderna, LFK; Knauf, S; Chuma, IS; Keyyu, JD; Kitchener, AC; Farh, K; Rogers, J; Marques-Bonet, T; Detwil (2023). Complex Evolutionary History With Extensive Ancestral Gene Flow in an African Primate Radiation. Molecular Biology And Evolution, 40(12), msad247-. DOI: 10.1093/molbev/msad247https://doi.org/10.1093/molbev/msad247
Genetic newborn screening and digital technologies: A project protocol based on a dual approach to shorten the rare diseases diagnostic path in Europe2023-11-22Garnier, N; Berghout, J; Zygmunt, A; Singh, D; Huang, KA; Kantz, W; Blankart, CR; Gillner, S; Zhao, JW; Roettger, R; Saier, C; Kirschner, J; Schenk, J (2023). Genetic newborn screening and digital technologies: A project protocol based on a dual approach to shorten the rare diseases diagnostic path in Europe. Plos One, 18(11), e0293503-. DOI: 10.1371/journal.pone.0293503https://doi.org/10.1371/journal.pone.0293503
Tumor heterogeneity and tumor-microglia interactions in primary and recurrent IDH1-mutant gliomas2023-11-21Blanco-Carmona, E; Narayanan, A; Hernandez, I; Nieto, JC; Elosua-Bayes, M; Sun, XY; Schmidt, C; Pamir, N; Ozduman, K; Herold-Mende, C; Pagani, F; Comi (2023). Tumor heterogeneity and tumor-microglia interactions in primary and recurrent IDH1-mutant gliomas. Cell Reports Medicine, 4(11), 101249-. DOI: 10.1016/j.xcrm.2023.101249https://doi.org/10.1016/j.xcrm.2023.101249
Inflammatory macrophages reprogram to immunosuppression by reducing mitochondrial translation2023-11-17Cortés, M; Brischetto, A; Martinez-Campanario, MC; Ninfali, C; Domínguez, V; Fernández, S; Celis, R; Esteve-Codina, A; Lozano, JJ; Sidorova, J; Garrab (2023). Inflammatory macrophages reprogram to immunosuppression by reducing mitochondrial translation. Nature Communications, 14(1), 7471-. DOI: 10.1038/s41467-023-42277-4https://doi.org/10.1038/s41467-023-42277-4
A human in vitro neuronal model for studying homeostatic plasticity at the network level2023-11-14Yuan, XM; Puvogel, S; van Rhijn, JR; Ciptasari, U; Esteve-Codina, A; Meijer, M; Rouschop, S; Hugte, EJHV; Oudakker, A; Schoenmaker, C; Frega, M; Schub (2023). A human in vitro neuronal model for studying homeostatic plasticity at the network level. Stem Cell Reports, 18(11), 2222-2239. DOI: 10.1016/j.stemcr.2023.09.011https://doi.org/10.1016/j.stemcr.2023.09.011
The adaptive antioxidant response during fasting- induced muscle atrophy is oppositely regulated by ZEB1 and ZEB22023-11-14Ninfali, C; Cortés, M; Martínez-Campanario, MC; Domínguez, V; Han, L; Tobías, E; Esteve-Codina, A; Enrich, C; Pintado, B; Garrabou, G; Postigo, A (2023). The adaptive antioxidant response during fasting- induced muscle atrophy is oppositely regulated by ZEB1 and ZEB2. Proceedings Of The National Academy Of Sciences Of The United States Of America, 120(46), e2301120120-. DOI: 10.1073/pnas.2301120120https://doi.org/10.1073/pnas.2301120120
Quantification of rare somatic single nucleotide variants by droplet digital PCR using SuperSelective primers2023-11-03Pablo-Fontecha, V; Hernández-Illán, E; Reparaz, A; Asensio, E; Morata, J; Tonda, R; Lahoz, S; Parra, C; Lozano, JJ; García-Heredia, A; Martínez-Roca, (2023). Quantification of rare somatic single nucleotide variants by droplet digital PCR using SuperSelective primers. Scientific Reports, 13(1), 18997-. DOI: 10.1038/s41598-023-39874-0https://doi.org/10.1038/s41598-023-39874-0
Retrospective analysis of persistent HyperCKemia with or without muscle weakness in a case series from Greece highlights vast DMD variants' heterogeneity2023-11-02Kekou, K; Svingou, M; Vogiatzakis, N; Nitsa, E; Veltra, D; Marinakis, NM; Tilemis, FN; Tzetis, M; Mitrakos, A; Tsaroucha, C; Selenti, N; Papadimas, GK (2023). Retrospective analysis of persistent HyperCKemia with or without muscle weakness in a case series from Greece highlights vast DMD variants' heterogeneity. Expert Review Of Molecular Diagnostics, 23(11), 999-1010. DOI: 10.1080/14737159.2023.2264181https://doi.org/10.1080/14737159.2023.2264181
Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales2023-11-01Alioto, TS; Gut, M; Rodiño-Janeiro, BK; Cruz, F; Gómez-Garrido, J; Vázquez-Ucha, JC; Mata, C; Antoni, R; Briansó, F; Dabad, M; Casals, E; Ingham, M; A (2023). Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales. Microbial Genomics, 9(11), 1132-. DOI: 10.1099/mgen.0.001132https://doi.org/10.1099/mgen.0.001132
The mesodermal and myogenic specification of hESCs depend on ZEB1 and are inhibited by ZEB22023-10-31Ninfali, C; Siles, L; Esteve-Codina, A; Postigo, A (2023). The mesodermal and myogenic specification of hESCs depend on ZEB1 and are inhibited by ZEB2. Cell Reports, 42(10), 113222-. DOI: 10.1016/j.celrep.2023.113222https://doi.org/10.1016/j.celrep.2023.113222
The EMT factor ZEB1 paradoxically inhibits EMT in BRAF-mutant carcinomas2023-10-23Sánchez-Tilló, E; Pedrosa, L; Vila, I; Chen, YX; Györffy, B; Sánchez-Moral, L; Siles, L; Lozano, JJ; Esteve-Codina, A; Darling, DS; Cuatrecasas, M; Ca (2023). The EMT factor ZEB1 paradoxically inhibits EMT in BRAF-mutant carcinomas. Jci Insight, 8(20), e164629-. DOI: 10.1172/jci.insight.164629https://doi.org/10.1172/jci.insight.164629
Germ line variants in patients with acute myeloid leukemia without a suspicion of hereditary hematologic malignancy syndrome2023-10-10Guijarro, F; López-Guerra, M; Morata, J; Bataller, A; Paz, S; Cornet-Masana, JM; Banús-Mulet, A; Cuesta-Casanovas, L; Carbó, JM; Castaño-Díez, S; Jimé (2023). Germ line variants in patients with acute myeloid leukemia without a suspicion of hereditary hematologic malignancy syndrome. Blood Advances, 7(19), 5799-5811. DOI: 10.1182/bloodadvances.2023009742https://doi.org/10.1182/bloodadvances.2023009742
Blastomeres of 8-cell mouse embryos differ in their ability to generate embryonic stem cells and produce lines with different transcriptional signatures2023-10-09Alonso-Alonso, S; Esteve-Codina, A; Martin-Mur, B; Alvarez-González, L; Ruiz-Herrera, A; Santaló, J; Ibáñez, E (2023). Blastomeres of 8-cell mouse embryos differ in their ability to generate embryonic stem cells and produce lines with different transcriptional signatures. Frontiers In Cell And Developmental Biology, 11(), 1274660-. DOI: 10.3389/fcell.2023.1274660https://doi.org/10.3389/fcell.2023.1274660
Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome2023-10-01Cruz, F; Gómez-Garrido, J; Gut, M; Alioto, TS; Pons, J; Alós, J; Barcelo-Serra, M (2023). Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome. Dna Research, 30(5), -. DOI: 10.1093/dnares/dsad021https://doi.org/10.1093/dnares/dsad021
A new assemblage of late Neanderthal remains from Cova Simanya (NE Iberia)2023-09-19Morales, JI; Cebrià, A; Soto, M; Rodríguez-Hidalgo, A; Hernando, R; Moreno-Ribas, E; Lombao, D; Rabuñal, JR; Martín-Perea, DM; García-Tabernero, A; Al (2023). A new assemblage of late Neanderthal remains from Cova Simanya (NE Iberia). Frontiers In Earth Science, 11(), 1230707-. DOI: 10.3389/feart.2023.1230707https://doi.org/10.3389/feart.2023.1230707