TitleDateAuthorsDOI
Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet2020-01-06Gelabert, P; Sandoval-Velasco, M; Serres, A; de Manuel, M; Renom, P; Margaryan, A; Stiller, J; De-Dios, T; Fang, Q; Feng, SH; Mañosa, S; Pacheco, G; F (2020). Evolutionary History, Genomic Adaptation to Toxic Diet, and Extinction of the Carolina Parakeet. Current Biology, 30(1), 108-+. DOI: 10.1016/j.cub.2019.10.066https://doi.org/10.1016/j.cub.2019.10.066
Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence2020-01-01Alioto, T; Alexiou, KG; Bardil, A; Barteri, F; Castanera, R; Cruz, F; Dhingra, A; Duval, H; Martí, AFI; Frias, L; Galán, B; García, JL; Howad, W; Góme (2020). Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence. Plant Journal, 101(2), 455-472. DOI: 10.1111/tpj.14538https://doi.org/10.1111/tpj.14538
The ethylene receptors CpETR1A and CpETR2B cooperate in the control of sex determination in Cucurbita pepo2020-01-01Garcia, A; Aguado, E; Martinez, C; Loska, D; Beltran, S; Valenzuela, JL; Garrido, D; Jamilena, M (2020). The ethylene receptors CpETR1A and CpETR2B cooperate in the control of sex determination in Cucurbita pepo. Journal Of Experimental Botany, 71(1), 154-167. DOI: 10.1093/jxb/erz417https://doi.org/10.1093/jxb/erz417
Confirmation of TACO1 as a Leigh Syndrome Disease Gene in Two Additional Families2020-01-01Oktay, Y; Güngör, S; Zeltner, L; Wiethoff, S; Schöls, L; Sonmezler, E; Yilmaz, E; Munro, B; Bender, B; Kernstock, C; Kaemereit, S; Liepelt, I; Töpf, A (2020). Confirmation of TACO1 as a Leigh Syndrome Disease Gene in Two Additional Families. J Neuromuscul Dis, 7(3), 301-308. DOI: 10.3233/JND-200510https://doi.org/10.3233/JND-200510
Improved Criteria for the Classification of Titin Variants in Inherited Skeletal Myopathies2020-01-01Savarese, M; Johari, M; Johnson, K; Arumilli, M; Torella, A; Töpf, A; Rubegni, A; Kuhn, M; Giugliano, T; Gläser, D; Fattori, F; Thompson, R; Penttilä, (2020). Improved Criteria for the Classification of Titin Variants in Inherited Skeletal Myopathies. , 7(2), 153-166. DOI: 10.3233/JND-190423https://doi.org/10.3233/JND-190423
Resistome analyses of sputum from COPD and healthy subjects reveals bacterial load-related prevalence of target genes2020-01-01Ramsheh, MY; Haldar, K; Bafadhel, M; George, L; Free, RC; John, C; Reeve, NF; Ziegler-Heitbrock, L; Gut, I; Singh, D; Mistry, V; Tobin, MD; Oggioni, M (2020). Resistome analyses of sputum from COPD and healthy subjects reveals bacterial load-related prevalence of target genes. Thorax, 75(1), 8-16. DOI: 10.1136/thoraxjnl-2019-213485https://doi.org/10.1136/thoraxjnl-2019-213485
Blood-derived biomarkers correlate with clinical progression in Duchenne muscular dystrophy2020-01-01Strandberg, K; Ayoglu, B; Roos, A; Reza, M; Niks, E; Signorelli, M; Fasterius, E; Pontén, F; Lochmüller, H; Domingos, J; Ala, P; Muntoni, F; Aartsma-R (2020). Blood-derived biomarkers correlate with clinical progression in Duchenne muscular dystrophy. J Neuromuscul Dis, 7(3), 231-246. DOI: 10.3233/JND-190454https://doi.org/10.3233/JND-190454
The ELIXIR Human Copy Number Variations Community: Building bioinformatics infrastructure for research2020-01-01Salgado D; Béroud C; Armean IM; Baudis M; Beltran S; Capella-Gutierrez S; Carvalho-Silva D; Dominguez Del Angel V; Dopazo J; Furlong LI; Gao B; Garcia (2020). The ELIXIR Human Copy Number Variations Community: Building bioinformatics infrastructure for research. F1000research, 9(), -. DOI: 10.12688/f1000research.24887.1https://doi.org/10.12688/f1000research.24887.1
From research to rapid response: Mass COVID-19 testing by volunteers at the Centre for Genomic Regulation2020-01-01Ghose R; Aranguren-Ibáñez A; Arecco N; Balboa D; Bataller M; Beltran S; Benisty H; Bénard A; Bernardo E; Carbonell Sala S; Casals E; Ciampi L; Condemi (2020). From research to rapid response: Mass COVID-19 testing by volunteers at the Centre for Genomic Regulation. F1000research, 9(), 1336-. DOI: 10.12688/f1000research.27497.1https://doi.org/10.12688/f1000research.27497.1
High degree of polyclonality hinders somatic mutation calling in lung brush samples of COPD cases and controls2019-12-27Thun, GA; Derdak, S; Castro-Giner, F; Apunte-Ramos, K; Agueda, L; Wjst, M; Boland, A; Deleuze, JF; Kolsum, U; Heiss-Neumann, MS; Nowinski, A; Gorecka, (2019). High degree of polyclonality hinders somatic mutation calling in lung brush samples of COPD cases and controls. Scientific Reports, 9(1), 20158-. DOI: 10.1038/s41598-019-56618-1https://doi.org/10.1038/s41598-019-56618-1
Enamel proteome shows that Gigantopithecus was an early diverging pongine2019-12-12Welker, F; Ramos-Madrigal, J; Kuhlwilm, M; Liao, W; Gutenbrunner, P; de Manuel, M; Samodova, D; Mackie, M; Allentoft, ME; Bacon, AM; Collins, MJ; Cox, (2019). Enamel proteome shows that Gigantopithecus was an early diverging pongine. Nature, 576(7786), 262-+. DOI: 10.1038/s41586-019-1728-8https://doi.org/10.1038/s41586-019-1728-8
The Genome Sequence of the Eastern Woodchuck (Marmota monax) - A Preclinical Animal Model for Chronic Hepatitis B2019-12-01Alioto, TS; Cruz, F; Gómez-Garrido, J; Triyatni, M; Gut, M; Frias, L; Esteve-Codina, A; Menne, S; Kiialainen, A; Kumpesa, N; Birzele, F; Schmucki, R; (2019). The Genome Sequence of the Eastern Woodchuck (Marmota monax) - A Preclinical Animal Model for Chronic Hepatitis B. G3-Genes Genomes Genetics, 9(12), 3943-3952. DOI: 10.1534/g3.119.400413https://doi.org/10.1534/g3.119.400413
Admixture in Mammals and How to Understand Its Functional Implications: On the Abundance of Gene Flow in Mammalian Species, Its Impact on the Genome, and Roads into a Functional Understanding2019-12-01Fontsere, C; de Manuel, M; Marques-Bonet, T; Kuhlwilm, M (2019). Admixture in Mammals and How to Understand Its Functional Implications: On the Abundance of Gene Flow in Mammalian Species, Its Impact on the Genome, and Roads into a Functional Understanding. Bioessays, 41(12), 1900123-. DOI: 10.1002/bies.201900123https://doi.org/10.1002/bies.201900123
Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation2019-12-01Brinkman, AB; Nik-Zainal, S; Simmer, F; Rodríguez-González, FG; Smid, M; Alexandrov, LB; Butler, A; Martink, S; Davies, H; Glodzik, D; Zou, XQ; Ramakr (2019). Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation. Nature Communications, 10(1), 1749-. DOI: 10.1038/s41467-019-09828-0https://doi.org/10.1038/s41467-019-09828-0
Topological Constraints in Eukaryotic Genomes and How They Can Be Exploited to Improve Spatial Models of Chromosomes2019-11-15Rosa, A; Di Stefano, M; Micheletti, C (2019). Topological Constraints in Eukaryotic Genomes and How They Can Be Exploited to Improve Spatial Models of Chromosomes. Frontiers In Molecular Biosciences, 6(), 127-. DOI: 10.3389/fmolb.2019.00127https://doi.org/10.3389/fmolb.2019.00127
Recurrent somatic mutations reveal new insights into consequences of mutagenic processes in cancer2019-11-01Stobbe, MD; Thun, GA; Diéguez-Docampo, A; Oliva, M; Whalley, JP; Raineri, E; Gut, IG (2019). Recurrent somatic mutations reveal new insights into consequences of mutagenic processes in cancer. Plos Computational Biology, 15(11), e1007496-. DOI: 10.1371/journal.pcbi.1007496https://doi.org/10.1371/journal.pcbi.1007496
Reproductive Cancer Risk Factors in Women With Myotonic Dystrophy (DM): Survey Data From the US and UK DM Registries2019-10-11Higgs, C; Hilbert, JE; Wood, L; Martens, WB; Marini-Bettolo, C; Nikolenko, N; Alsaggaf, R; Lochmüller, H; Moxley, RT; Greene, MH; Wang, YJ; Gadalla, S (2019). Reproductive Cancer Risk Factors in Women With Myotonic Dystrophy (DM): Survey Data From the US and UK DM Registries. Frontiers In Neurology, 10(), 1071-. DOI: 10.3389/fneur.2019.01071https://doi.org/10.3389/fneur.2019.01071
Nucleosome Dynamics: a new tool for the dynamic analysis of nucleosome positioning2019-10-10Buitrago, D; Codó, L; Illa, R; de Jorge, P; Battistini, F; Flores, O; Bayarri, G; Royo, R; Del Pino, M; Heath, S; Hospital, A; Gelpí, JL; Heath, IB; O (2019). Nucleosome Dynamics: a new tool for the dynamic analysis of nucleosome positioning. Nucleic Acids Research, 47(18), 9511-9523. DOI: 10.1093/nar/gkz759https://doi.org/10.1093/nar/gkz759
Reconstruction of protein domain evolution using single-cell amplified genomes of uncultured choanoflagellates sheds light on the origin of animals2019-10-07López-Escardó, D; Grau-Bové, X; Guillaumet-Adkins, A; Gut, M; Sieracki, ME; Ruiz-Trillo, I (2019). Reconstruction of protein domain evolution using single-cell amplified genomes of uncultured choanoflagellates sheds light on the origin of animals. Philosophical Transactions Of The Royal Society B-Biological Sciences, 374(1786), 20190088-. DOI: 10.1098/rstb.2019.0088https://doi.org/10.1098/rstb.2019.0088
CRISPR editing of sftb-1/SF3B1 in Caenorhabditis elegans allows the identification of synthetic interactions with cancer-related mutations and the chemical inhibition of splicing.2019-10-01Serrat, X; Kukhtar, D; Cornes, E; Esteve-Codina, A; Benlloch, H; Cecere, G; Cerón, J (2019). CRISPR editing of sftb-1/SF3B1 in Caenorhabditis elegans allows the identification of synthetic interactions with cancer-related mutations and the chemical inhibition of splicing.. Plos Genetics, 15(10), e1008464-. DOI: 10.1371/journal.pgen.1008464https://doi.org/10.1371/journal.pgen.1008464